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Thermo Fisher Scientific
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Thermo Fisher Scientific Software Engineer Salaries in Greater San Diego Area

Software Engineer compensation in Greater San Diego Area at Thermo Fisher Scientific ranges from $89.5K per year for Software Engineer II to $165K per year for Staff Engineer. The median yearly compensation in Greater San Diego Area package totals $110K. View the base salary, stock, and bonus breakdowns for Thermo Fisher Scientific's total compensation packages. Last updated: 5/17/2026

Average Compensation By Level
Add CompCompare Levels
Level Name
Total
Base
Stock
Bonus
Software Engineer I
(Entry Level)
$ --
$ --
$ --
$ --
Software Engineer II
$89.5K
$86.3K
$0
$3.3K
Software Engineer III
$117K
$115K
$0
$2.3K
Staff Engineer
$165K
$147K
$2K
$16.6K
View 3 More Levels
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Vesting Schedule

25%

YR 1

25%

YR 2

25%

YR 3

25%

YR 4

At Thermo Fisher Scientific, Stock/equity grants are subject to a 4-year vesting schedule:

  • 25% vests in the 1st-YR (25.00% annually)

  • 25% vests in the 2nd-YR (2.08% monthly)

  • 25% vests in the 3rd-YR (2.08% monthly)

  • 25% vests in the 4th-YR (2.08% monthly)



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Full-Stack Software Engineer

FAQ

The highest paying salary package reported for a Software Engineer at Thermo Fisher Scientific in Greater San Diego Area sits at a yearly total compensation of $181,000. This includes base salary as well as any potential stock compensation and bonuses.
The median yearly total compensation reported at Thermo Fisher Scientific for the Software Engineer role in Greater San Diego Area is $141,000.
When negotiating your Software Engineer offer at Thermo Fisher Scientific, leverage salary data to understand market rates, highlight your relevant experience, and consider all components of the compensation package. Our professional negotiators have helped candidates secure $50K+ more in total compensation.

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